WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R06C7.9a.1 Sequence Name  R06C7.9a.1
Length (nt)  2284   Chromosome Location  I: 7255511-7258699
Chromosome . Primary Identifier  I Chromosome Location . Start  7255511
Chromosome Location . End  7258699 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R06C7.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011066 ztf-15 R06C7.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R06C7.9a R06C7.9a 2190   I: 7255527-7255550

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R06C7.9a.1 7255511 7258699 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon18452   40   I: 7255511-7255550 Caenorhabditis elegans
Exon18453   114   I: 7255595-7255708 Caenorhabditis elegans
Exon18455   90   I: 7255754-7255843 Caenorhabditis elegans
Exon18457   87   I: 7255892-7255978 Caenorhabditis elegans
Exon18459   216   I: 7256021-7256236 Caenorhabditis elegans
Exon18461   474   I: 7256421-7256894 Caenorhabditis elegans
Exon18463   393   I: 7257034-7257426 Caenorhabditis elegans
Exon18465   495   I: 7257728-7258222 Caenorhabditis elegans
Exon18467   144   I: 7258275-7258418 Caenorhabditis elegans
Exon18469   231   I: 7258469-7258699 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R06C7.9a.1 7255511 7258699 1

1 Sequence

Length
2284

1 Sequence Ontology Term

Identifier Name Description
transcript