WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C31E10.5.1 Sequence Name  C31E10.5.1
Length (nt)  2288   Chromosome Location  X: 13991458-13995834
Chromosome . Primary Identifier  X Chromosome Location . Start  13991458
Chromosome Location . End  13995834 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C31E10.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007846 C31E10.5 C31E10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C31E10.5 C31E10.5 1683   X: 13992034-13992174

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C31E10.5.1 13991458 13995834 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon258962   717   X: 13991458-13992174 Caenorhabditis elegans
Exon258963   202   X: 13992415-13992616 Caenorhabditis elegans
Exon258964   227   X: 13992665-13992891 Caenorhabditis elegans
Exon258965   217   X: 13993036-13993252 Caenorhabditis elegans
Exon258966   254   X: 13993444-13993697 Caenorhabditis elegans
Exon258967   406   X: 13994962-13995367 Caenorhabditis elegans
Exon258968   104   X: 13995470-13995573 Caenorhabditis elegans
Exon258969   111   X: 13995622-13995732 Caenorhabditis elegans
Exon258970   50   X: 13995785-13995834 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C31E10.5.1 13991458 13995834 -1

1 Sequence

Length
2288

1 Sequence Ontology Term

Identifier Name Description
transcript