WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C33G3.1b.2 Sequence Name  C33G3.1b.2
Length (nt)  3253   Chromosome Location  X: 14050813-14063926
Chromosome . Primary Identifier  X Chromosome Location . Start  14050813
Chromosome Location . End  14063926 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33G3.1b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001116 dyc-1 C33G3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33G3.1b C33G3.1b 2664   X: 14050828-14050944

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C33G3.1b.2 14050813 14063926 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259037   132   X: 14050813-14050944 Caenorhabditis elegans
Exon259040   72   X: 14051165-14051236 Caenorhabditis elegans
Exon259042   155   X: 14051773-14051927 Caenorhabditis elegans
Exon259044   109   X: 14051973-14052081 Caenorhabditis elegans
Exon259050   45   X: 14056546-14056590 Caenorhabditis elegans
Exon259053   67   X: 14056760-14056826 Caenorhabditis elegans
Exon259056   146   X: 14057097-14057242 Caenorhabditis elegans
Exon259059   291   X: 14058186-14058476 Caenorhabditis elegans
Exon259062   135   X: 14058592-14058726 Caenorhabditis elegans
Exon259065   153   X: 14059186-14059338 Caenorhabditis elegans
Exon259068   249   X: 14059391-14059639 Caenorhabditis elegans
Exon259071   497   X: 14059780-14060276 Caenorhabditis elegans
Exon259075   220   X: 14060476-14060695 Caenorhabditis elegans
Exon259078   96   X: 14060742-14060837 Caenorhabditis elegans
Exon259081   200   X: 14060973-14061172 Caenorhabditis elegans
Exon259086   686   X: 14063241-14063926 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C33G3.1b.2 14050813 14063926 1

1 Sequence

Length
3253

1 Sequence Ontology Term

Identifier Name Description
transcript