WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C33G3.1a.1 Sequence Name  C33G3.1a.1
Length (nt)  3235   Chromosome Location  X: 14055010-14063930
Chromosome . Primary Identifier  X Chromosome Location . Start  14055010
Chromosome Location . End  14063930 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33G3.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001116 dyc-1 C33G3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33G3.1a C33G3.1a 2382   X: 14055285-14055455

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C33G3.1a.1 14055010 14063930 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259047   446   X: 14055010-14055455 Caenorhabditis elegans
Exon259048   45   X: 14056546-14056590 Caenorhabditis elegans
Exon259051   67   X: 14056760-14056826 Caenorhabditis elegans
Exon259054   146   X: 14057097-14057242 Caenorhabditis elegans
Exon259057   291   X: 14058186-14058476 Caenorhabditis elegans
Exon259060   135   X: 14058592-14058726 Caenorhabditis elegans
Exon259063   153   X: 14059186-14059338 Caenorhabditis elegans
Exon259066   249   X: 14059391-14059639 Caenorhabditis elegans
Exon259069   497   X: 14059780-14060276 Caenorhabditis elegans
Exon259073   220   X: 14060476-14060695 Caenorhabditis elegans
Exon259076   96   X: 14060742-14060837 Caenorhabditis elegans
Exon259079   200   X: 14060973-14061172 Caenorhabditis elegans
Exon259087   690   X: 14063241-14063930 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C33G3.1a.1 14055010 14063930 1

1 Sequence

Length
3235

1 Sequence Ontology Term

Identifier Name Description
transcript