WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C33G3.6.1 Sequence Name  C33G3.6.1
Length (nt)  2165   Chromosome Location  X: 14080381-14084318
Chromosome . Primary Identifier  X Chromosome Location . Start  14080381
Chromosome Location . End  14084318 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33G3.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007906 C33G3.6 C33G3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33G3.6 C33G3.6 1875   X: 14080668-14080808

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C33G3.6.1 14080381 14084318 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259128   428   X: 14080381-14080808 Caenorhabditis elegans
Exon259129   94   X: 14080856-14080949 Caenorhabditis elegans
Exon259131   84   X: 14081004-14081087 Caenorhabditis elegans
Exon259133   84   X: 14081289-14081372 Caenorhabditis elegans
Exon259135   72   X: 14081565-14081636 Caenorhabditis elegans
Exon259137   69   X: 14081680-14081748 Caenorhabditis elegans
Exon259139   72   X: 14081960-14082031 Caenorhabditis elegans
Exon259141   42   X: 14082081-14082122 Caenorhabditis elegans
Exon259143   72   X: 14082216-14082287 Caenorhabditis elegans
Exon259145   66   X: 14082393-14082458 Caenorhabditis elegans
Exon259147   42   X: 14082504-14082545 Caenorhabditis elegans
Exon259149   128   X: 14082596-14082723 Caenorhabditis elegans
Exon259151   81   X: 14082771-14082851 Caenorhabditis elegans
Exon259153   486   X: 14083036-14083521 Caenorhabditis elegans
Exon259156   246   X: 14083660-14083905 Caenorhabditis elegans
Exon259158   99   X: 14084220-14084318 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C33G3.6.1 14080381 14084318 -1

1 Sequence

Length
2165

1 Sequence Ontology Term

Identifier Name Description
transcript