WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F16B12.6.1 Sequence Name  F16B12.6.1
Length (nt)  4456   Chromosome Location  X: 14102316-14107913
Chromosome . Primary Identifier  X Chromosome Location . Start  14102316
Chromosome Location . End  14107913 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16B12.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008882 F16B12.6 F16B12.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16B12.6 F16B12.6 4179   X: 14102359-14102424

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F16B12.6.1 14102316 14107913 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259193   109   X: 14102316-14102424 Caenorhabditis elegans
Exon259194   330   X: 14102594-14102923 Caenorhabditis elegans
Exon259195   203   X: 14102978-14103180 Caenorhabditis elegans
Exon259196   291   X: 14103228-14103518 Caenorhabditis elegans
Exon259197   325   X: 14103584-14103908 Caenorhabditis elegans
Exon259198   165   X: 14103956-14104120 Caenorhabditis elegans
Exon259199   277   X: 14104170-14104446 Caenorhabditis elegans
Exon259200   173   X: 14104513-14104685 Caenorhabditis elegans
Exon259201   500   X: 14104945-14105444 Caenorhabditis elegans
Exon259202   229   X: 14105500-14105728 Caenorhabditis elegans
Exon259203   90   X: 14105779-14105868 Caenorhabditis elegans
Exon259204   141   X: 14105921-14106061 Caenorhabditis elegans
Exon259205   182   X: 14106115-14106296 Caenorhabditis elegans
Exon259206   161   X: 14106351-14106511 Caenorhabditis elegans
Exon259207   680   X: 14106587-14107266 Caenorhabditis elegans
Exon259208   600   X: 14107314-14107913 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F16B12.6.1 14102316 14107913 1

1 Sequence

Length
4456

1 Sequence Ontology Term

Identifier Name Description
transcript