WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F16B12.8.1 Sequence Name  F16B12.8.1
Length (nt)  1149   Chromosome Location  X: 14111263-14113447
Chromosome . Primary Identifier  X Chromosome Location . Start  14111263
Chromosome Location . End  14113447 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16B12.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008884 nhr-281 F16B12.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16B12.8 F16B12.8 1149   X: 14111263-14111582

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F16B12.8.1 14111263 14113447 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259213   320   X: 14111263-14111582 Caenorhabditis elegans
Exon259214   253   X: 14111689-14111941 Caenorhabditis elegans
Exon259215   111   X: 14112004-14112114 Caenorhabditis elegans
Exon259216   357   X: 14112366-14112722 Caenorhabditis elegans
Exon259217   108   X: 14113340-14113447 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F16B12.8.1 14111263 14113447 -1

1 Sequence

Length
1149

1 Sequence Ontology Term

Identifier Name Description
transcript