WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28H6.6.1 Sequence Name  F28H6.6.1
Length (nt)  2841   Chromosome Location  X: 14117069-14125879
Chromosome . Primary Identifier  X Chromosome Location . Start  14117069
Chromosome Location . End  14125879 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28H6.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009234 F28H6.6 F28H6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28H6.6 F28H6.6 2319   X: 14117586-14117801

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F28H6.6.1 14117069 14125879 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259222   733   X: 14117069-14117801 Caenorhabditis elegans
Exon259223   60   X: 14117869-14117928 Caenorhabditis elegans
Exon259224   81   X: 14117995-14118075 Caenorhabditis elegans
Exon259225   153   X: 14118126-14118278 Caenorhabditis elegans
Exon259226   236   X: 14118325-14118560 Caenorhabditis elegans
Exon259227   70   X: 14118613-14118682 Caenorhabditis elegans
Exon259228   69   X: 14119197-14119265 Caenorhabditis elegans
Exon259229   315   X: 14122523-14122837 Caenorhabditis elegans
Exon259230   96   X: 14122888-14122983 Caenorhabditis elegans
Exon259231   198   X: 14123055-14123252 Caenorhabditis elegans
Exon259232   174   X: 14123306-14123479 Caenorhabditis elegans
Exon259233   96   X: 14123857-14123952 Caenorhabditis elegans
Exon259234   129   X: 14124132-14124260 Caenorhabditis elegans
Exon259235   117   X: 14124450-14124566 Caenorhabditis elegans
Exon259236   144   X: 14125200-14125343 Caenorhabditis elegans
Exon259237   57   X: 14125528-14125584 Caenorhabditis elegans
Exon259238   69   X: 14125632-14125700 Caenorhabditis elegans
Exon259239   44   X: 14125836-14125879 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F28H6.6.1 14117069 14125879 -1

1 Sequence

Length
2841

1 Sequence Ontology Term

Identifier Name Description
transcript