WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28H6.4.1 Sequence Name  F28H6.4.1
Length (nt)  3226   Chromosome Location  X: 14127872-14133528
Chromosome . Primary Identifier  X Chromosome Location . Start  14127872
Chromosome Location . End  14133528 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28H6.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009233 F28H6.4 F28H6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28H6.4 F28H6.4 3003   X: 14127881-14127953

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28H6.4.1 14127872 14133528 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259267   82   X: 14127872-14127953 Caenorhabditis elegans
Exon259268   307   X: 14128048-14128354 Caenorhabditis elegans
Exon259269   420   X: 14128407-14128826 Caenorhabditis elegans
Exon259270   111   X: 14129414-14129524 Caenorhabditis elegans
Exon259271   339   X: 14129582-14129920 Caenorhabditis elegans
Exon259272   111   X: 14129970-14130080 Caenorhabditis elegans
Exon259273   123   X: 14130397-14130519 Caenorhabditis elegans
Exon259274   204   X: 14130573-14130776 Caenorhabditis elegans
Exon259275   429   X: 14130932-14131360 Caenorhabditis elegans
Exon259276   405   X: 14131447-14131851 Caenorhabditis elegans
Exon259277   222   X: 14131903-14132124 Caenorhabditis elegans
Exon259278   187   X: 14132826-14133012 Caenorhabditis elegans
Exon259279   286   X: 14133243-14133528 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28H6.4.1 14127872 14133528 1

1 Sequence

Length
3226

1 Sequence Ontology Term

Identifier Name Description
transcript