WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F07A5.7a.1 Sequence Name  F07A5.7a.1
Length (nt)  3359   Chromosome Location  I: 7376604-7383197
Chromosome . Primary Identifier  I Chromosome Location . Start  7376604
Chromosome Location . End  7383197 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F07A5.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006754 unc-15 F07A5.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F07A5.7a F07A5.7a 2619   I: 7377295-7377321

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F07A5.7a.1 7376604 7383197 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon18788   218   I: 7376604-7376821 Caenorhabditis elegans
Exon18789   435   I: 7376887-7377321 Caenorhabditis elegans
Exon18791   777   I: 7377596-7378372 Caenorhabditis elegans
Exon18794   130   I: 7378422-7378551 Caenorhabditis elegans
Exon18798   932   I: 7378601-7379532 Caenorhabditis elegans
Exon18800   105   I: 7379655-7379759 Caenorhabditis elegans
Exon18802   220   I: 7380067-7380286 Caenorhabditis elegans
Exon18804   56   I: 7381358-7381413 Caenorhabditis elegans
Exon18806   111   I: 7381461-7381571 Caenorhabditis elegans
Exon18808   87   I: 7381641-7381727 Caenorhabditis elegans
Exon18810   57   I: 7381774-7381830 Caenorhabditis elegans
Exon18812   231   I: 7382967-7383197 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F07A5.7a.1 7376604 7383197 -1

1 Sequence

Length
3359

1 Sequence Ontology Term

Identifier Name Description
transcript