WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28H6.2a.1 Sequence Name  F28H6.2a.1
Length (nt)  1215   Chromosome Location  X: 14141946-14144878
Chromosome . Primary Identifier  X Chromosome Location . Start  14141946
Chromosome Location . End  14144878 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28H6.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009231 ceh-89 F28H6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28H6.2a F28H6.2a 528   X: 14141946-14141984

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28H6.2a.1 14141946 14144878 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259266   39   X: 14141946-14141984 Caenorhabditis elegans
Exon259268   66   X: 14142135-14142200 Caenorhabditis elegans
Exon259270   54   X: 14142247-14142300 Caenorhabditis elegans
Exon259272   90   X: 14143373-14143462 Caenorhabditis elegans
Exon259274   138   X: 14143506-14143643 Caenorhabditis elegans
Exon259276   129   X: 14143700-14143828 Caenorhabditis elegans
Exon259278   699   X: 14144180-14144878 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28H6.2a.1 14141946 14144878 1

1 Sequence

Length
1215

1 Sequence Ontology Term

Identifier Name Description
transcript