WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K06G5.1.1 Sequence Name  K06G5.1.1
Length (nt)  1587   Chromosome Location  X: 14214973-14219045
Chromosome . Primary Identifier  X Chromosome Location . Start  14214973
Chromosome Location . End  14219045 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K06G5.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010605 K06G5.1 K06G5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K06G5.1 K06G5.1 1524   X: 14214974-14215013

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K06G5.1.1 14214973 14219045 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259410   41   X: 14214973-14215013 Caenorhabditis elegans
Exon259411   173   X: 14215365-14215537 Caenorhabditis elegans
Exon259413   95   X: 14215588-14215682 Caenorhabditis elegans
Exon259415   95   X: 14215726-14215820 Caenorhabditis elegans
Exon259417   194   X: 14216455-14216648 Caenorhabditis elegans
Exon259419   129   X: 14217173-14217301 Caenorhabditis elegans
Exon259421   77   X: 14217350-14217426 Caenorhabditis elegans
Exon259423   114   X: 14217471-14217584 Caenorhabditis elegans
Exon259425   212   X: 14217849-14218060 Caenorhabditis elegans
Exon259427   161   X: 14218385-14218545 Caenorhabditis elegans
Exon259429   92   X: 14218593-14218684 Caenorhabditis elegans
Exon259432   204   X: 14218842-14219045 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K06G5.1.1 14214973 14219045 1

1 Sequence

Length
1587

1 Sequence Ontology Term

Identifier Name Description
transcript