WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K04C1.2a.1 Sequence Name  K04C1.2a.1
Length (nt)  1990   Chromosome Location  X: 14238708-14241350
Chromosome . Primary Identifier  X Chromosome Location . Start  14238708
Chromosome Location . End  14241350 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04C1.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010552 K04C1.2 K04C1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04C1.2a K04C1.2a 1578   X: 14238723-14238761

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K04C1.2a.1 14238708 14241350 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259487   54   X: 14238708-14238761 Caenorhabditis elegans
Exon259489   85   X: 14238807-14238891 Caenorhabditis elegans
Exon259491   412   X: 14238965-14239376 Caenorhabditis elegans
Exon259493   46   X: 14239513-14239558 Caenorhabditis elegans
Exon259495   657   X: 14239697-14240353 Caenorhabditis elegans
Exon259497   66   X: 14240402-14240467 Caenorhabditis elegans
Exon259500   670   X: 14240681-14241350 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K04C1.2a.1 14238708 14241350 1

1 Sequence

Length
1990

1 Sequence Ontology Term

Identifier Name Description
transcript