WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E02H4.1b.1 Sequence Name  E02H4.1b.1
Length (nt)  2196   Chromosome Location  X: 14269489-14277081
Chromosome . Primary Identifier  X Chromosome Location . Start  14269489
Chromosome Location . End  14277081 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E02H4.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000952 del-1 E02H4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E02H4.1b E02H4.1b 2010   X: 14269634-14269702

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:E02H4.1b.1 14269489 14277081 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259540   214   X: 14269489-14269702 Caenorhabditis elegans
Exon259543   117   X: 14272013-14272129 Caenorhabditis elegans
Exon259546   135   X: 14272192-14272326 Caenorhabditis elegans
Exon259549   99   X: 14272638-14272736 Caenorhabditis elegans
Exon259552   91   X: 14273255-14273345 Caenorhabditis elegans
Exon259555   75   X: 14273601-14273675 Caenorhabditis elegans
Exon259558   91   X: 14273770-14273860 Caenorhabditis elegans
Exon259561   100   X: 14274612-14274711 Caenorhabditis elegans
Exon259564   179   X: 14274777-14274955 Caenorhabditis elegans
Exon259567   123   X: 14275048-14275170 Caenorhabditis elegans
Exon259570   92   X: 14275215-14275306 Caenorhabditis elegans
Exon259573   260   X: 14275570-14275829 Caenorhabditis elegans
Exon259576   118   X: 14275884-14276001 Caenorhabditis elegans
Exon259579   181   X: 14276346-14276526 Caenorhabditis elegans
Exon259582   125   X: 14276710-14276834 Caenorhabditis elegans
Exon259585   196   X: 14276886-14277081 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:E02H4.1b.1 14269489 14277081 1

1 Sequence

Length
2196

1 Sequence Ontology Term

Identifier Name Description
transcript