WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E02H4.2a.1 Sequence Name  E02H4.2a.1
Length (nt)  2156   Chromosome Location  X: 14277122-14281626
Chromosome . Primary Identifier  X Chromosome Location . Start  14277122
Chromosome Location . End  14281626 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E02H4.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008460 E02H4.2 E02H4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E02H4.2a E02H4.2a 1887   X: 14277364-14277397

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:E02H4.2a.1 14277122 14281626 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259587   276   X: 14277122-14277397 Caenorhabditis elegans
Exon259589   81   X: 14278036-14278116 Caenorhabditis elegans
Exon259591   57   X: 14278164-14278220 Caenorhabditis elegans
Exon259593   90   X: 14278325-14278414 Caenorhabditis elegans
Exon259594   769   X: 14278463-14279231 Caenorhabditis elegans
Exon259596   217   X: 14279286-14279502 Caenorhabditis elegans
Exon259598   84   X: 14279546-14279629 Caenorhabditis elegans
Exon259600   117   X: 14280426-14280542 Caenorhabditis elegans
Exon259602   96   X: 14280636-14280731 Caenorhabditis elegans
Exon259604   63   X: 14280775-14280837 Caenorhabditis elegans
Exon259606   162   X: 14280892-14281053 Caenorhabditis elegans
Exon259609   144   X: 14281483-14281626 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:E02H4.2a.1 14277122 14281626 -1

1 Sequence

Length
2156

1 Sequence Ontology Term

Identifier Name Description
transcript