WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E02H4.3a.1 Sequence Name  E02H4.3a.1
Length (nt)  5019   Chromosome Location  X: 14284752-14292571
Chromosome . Primary Identifier  X Chromosome Location . Start  14284752
Chromosome Location . End  14292571 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E02H4.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006517 madd-3 E02H4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E02H4.3a E02H4.3a 2664   X: 14285476-14285527

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:E02H4.3a.1 14284752 14292571 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259610   776   X: 14284752-14285527 Caenorhabditis elegans
Exon259620   143   X: 14285709-14285851 Caenorhabditis elegans
Exon259630   88   X: 14286107-14286194 Caenorhabditis elegans
Exon259640   163   X: 14286468-14286630 Caenorhabditis elegans
Exon259650   124   X: 14286740-14286863 Caenorhabditis elegans
Exon259660   171   X: 14286912-14287082 Caenorhabditis elegans
Exon259670   91   X: 14287155-14287245 Caenorhabditis elegans
Exon259680   181   X: 14288950-14289130 Caenorhabditis elegans
Exon259689   115   X: 14289186-14289300 Caenorhabditis elegans
Exon259699   3167   X: 14289405-14292571 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:E02H4.3a.1 14284752 14292571 -1

1 Sequence

Length
5019

1 Sequence Ontology Term

Identifier Name Description
transcript