WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E02H4.3e.1 Sequence Name  E02H4.3e.1
Length (nt)  2673   Chromosome Location  X: 14285476-14290940
Chromosome . Primary Identifier  X Chromosome Location . Start  14285476
Chromosome Location . End  14290940 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E02H4.3e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006517 madd-3 E02H4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E02H4.3e E02H4.3e 2673   X: 14285476-14285527

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:E02H4.3e.1 14285476 14290940 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259619   52   X: 14285476-14285527 Caenorhabditis elegans
Exon259625   143   X: 14285709-14285851 Caenorhabditis elegans
Exon259639   97   X: 14286107-14286203 Caenorhabditis elegans
Exon259645   163   X: 14286468-14286630 Caenorhabditis elegans
Exon259655   124   X: 14286740-14286863 Caenorhabditis elegans
Exon259665   171   X: 14286912-14287082 Caenorhabditis elegans
Exon259675   91   X: 14287155-14287245 Caenorhabditis elegans
Exon259685   181   X: 14288950-14289130 Caenorhabditis elegans
Exon259693   115   X: 14289186-14289300 Caenorhabditis elegans
Exon259698   1536   X: 14289405-14290940 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:E02H4.3e.1 14285476 14290940 -1

1 Sequence

Length
2673

1 Sequence Ontology Term

Identifier Name Description
transcript