WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C26C6.1b.2 Sequence Name  C26C6.1b.2
Length (nt)  5979   Chromosome Location  I: 7495436-7503506
Chromosome . Primary Identifier  I Chromosome Location . Start  7495436
Chromosome Location . End  7503506 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C26C6.1b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007042 pbrm-1 C26C6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C26C6.1b C26C6.1b 1542   I: 7501380-7501727

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C26C6.1b.2 7495436 7503506 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon19298   132   I: 7495436-7495567 Caenorhabditis elegans
Exon19301   998   I: 7495614-7496611 Caenorhabditis elegans
Exon19303   343   I: 7496664-7497006 Caenorhabditis elegans
Exon19305   527   I: 7497063-7497589 Caenorhabditis elegans
Exon19307   1752   I: 7497668-7499419 Caenorhabditis elegans
Exon19311   176   I: 7499612-7499787 Caenorhabditis elegans
Exon19314   101   I: 7499837-7499937 Caenorhabditis elegans
Exon19317   72   I: 7499985-7500056 Caenorhabditis elegans
Exon19320   411   I: 7501317-7501727 Caenorhabditis elegans
Exon19325   226   I: 7501825-7502050 Caenorhabditis elegans
Exon19329   437   I: 7502122-7502558 Caenorhabditis elegans
Exon19333   287   I: 7502605-7502891 Caenorhabditis elegans
Exon19337   124   I: 7502944-7503067 Caenorhabditis elegans
Exon19339   393   I: 7503114-7503506 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C26C6.1b.2 7495436 7503506 1

1 Sequence

Length
5979

1 Sequence Ontology Term

Identifier Name Description
transcript