WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C26C6.1a.1 Sequence Name  C26C6.1a.1
Length (nt)  6001   Chromosome Location  I: 7495437-7503577
Chromosome . Primary Identifier  I Chromosome Location . Start  7495437
Chromosome Location . End  7503577 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C26C6.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007042 pbrm-1 C26C6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C26C6.1a C26C6.1a 5652   I: 7495442-7495567

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C26C6.1a.1 7495437 7503577 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon19299   131   I: 7495437-7495567 Caenorhabditis elegans
Exon19300   998   I: 7495614-7496611 Caenorhabditis elegans
Exon19302   343   I: 7496664-7497006 Caenorhabditis elegans
Exon19304   527   I: 7497063-7497589 Caenorhabditis elegans
Exon19306   946   I: 7497668-7498613 Caenorhabditis elegans
Exon19308   758   I: 7498662-7499419 Caenorhabditis elegans
Exon19310   176   I: 7499612-7499787 Caenorhabditis elegans
Exon19313   101   I: 7499837-7499937 Caenorhabditis elegans
Exon19316   72   I: 7499985-7500056 Caenorhabditis elegans
Exon19319   411   I: 7501317-7501727 Caenorhabditis elegans
Exon19323   226   I: 7501825-7502050 Caenorhabditis elegans
Exon19327   437   I: 7502122-7502558 Caenorhabditis elegans
Exon19331   287   I: 7502605-7502891 Caenorhabditis elegans
Exon19335   124   I: 7502944-7503067 Caenorhabditis elegans
Exon19341   464   I: 7503114-7503577 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C26C6.1a.1 7495437 7503577 1

1 Sequence

Length
6001

1 Sequence Ontology Term

Identifier Name Description
transcript