WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C11H1.4a.1 Sequence Name  C11H1.4a.1
Length (nt)  3161   Chromosome Location  X: 14313927-14326726
Chromosome . Primary Identifier  X Chromosome Location . Start  14313927
Chromosome Location . End  14326726 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C11H1.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004191 prx-1 C11H1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C11H1.4a C11H1.4a 2991   X: 14313942-14314055

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C11H1.4a.1 14313927 14326726 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259739   129   X: 14313927-14314055 Caenorhabditis elegans
Exon259740   156   X: 14314135-14314290 Caenorhabditis elegans
Exon259741   84   X: 14314502-14314585 Caenorhabditis elegans
Exon259742   115   X: 14314818-14314932 Caenorhabditis elegans
Exon259743   125   X: 14315038-14315162 Caenorhabditis elegans
Exon259744   163   X: 14315293-14315455 Caenorhabditis elegans
Exon259745   170   X: 14315502-14315671 Caenorhabditis elegans
Exon259746   129   X: 14315717-14315845 Caenorhabditis elegans
Exon259747   124   X: 14316198-14316321 Caenorhabditis elegans
Exon259748   107   X: 14316370-14316476 Caenorhabditis elegans
Exon259749   164   X: 14316668-14316831 Caenorhabditis elegans
Exon259750   80   X: 14316895-14316974 Caenorhabditis elegans
Exon259751   99   X: 14317583-14317681 Caenorhabditis elegans
Exon259752   156   X: 14317755-14317910 Caenorhabditis elegans
Exon259753   146   X: 14317958-14318103 Caenorhabditis elegans
Exon259762   148   X: 14321801-14321948 Caenorhabditis elegans
Exon259763   88   X: 14322118-14322205 Caenorhabditis elegans
Exon259764   79   X: 14323139-14323217 Caenorhabditis elegans
Exon259766   135   X: 14323507-14323641 Caenorhabditis elegans
Exon259768   65   X: 14323695-14323759 Caenorhabditis elegans
Exon259774   146   X: 14325524-14325669 Caenorhabditis elegans
Exon259776   104   X: 14325821-14325924 Caenorhabditis elegans
Exon259778   160   X: 14326159-14326318 Caenorhabditis elegans
Exon259781   289   X: 14326438-14326726 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C11H1.4a.1 14313927 14326726 1

1 Sequence

Length
3161

1 Sequence Ontology Term

Identifier Name Description
transcript