WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K04G11.5a.3 Sequence Name  K04G11.5a.3
Length (nt)  1911   Chromosome Location  X: 14353290-14361639
Chromosome . Primary Identifier  X Chromosome Location . Start  14353290
Chromosome Location . End  14361639 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04G11.5a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002151 irk-3 K04G11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04G11.5a K04G11.5a 1125   X: 14353785-14353866

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K04G11.5a.3 14353290 14361639 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259818   577   X: 14353290-14353866 Caenorhabditis elegans
Exon259827   78   X: 14353972-14354049 Caenorhabditis elegans
Exon259835   110   X: 14354484-14354593 Caenorhabditis elegans
Exon259844   150   X: 14354641-14354790 Caenorhabditis elegans
Exon259851   153   X: 14355422-14355574 Caenorhabditis elegans
Exon259859   166   X: 14355618-14355783 Caenorhabditis elegans
Exon259865   53   X: 14357239-14357291 Caenorhabditis elegans
Exon259873   148   X: 14357390-14357537 Caenorhabditis elegans
Exon259877   124   X: 14358328-14358451 Caenorhabditis elegans
Exon259885   70   X: 14358996-14359065 Caenorhabditis elegans
Exon259888   282   X: 14361358-14361639 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K04G11.5a.3 14353290 14361639 -1

1 Sequence

Length
1911

1 Sequence Ontology Term

Identifier Name Description
transcript