WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K04G11.5a.1 Sequence Name  K04G11.5a.1
Length (nt)  1625   Chromosome Location  X: 14353294-14359065
Chromosome . Primary Identifier  X Chromosome Location . Start  14353294
Chromosome Location . End  14359065 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04G11.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002151 irk-3 K04G11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04G11.5a K04G11.5a 1125   X: 14353785-14353866

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K04G11.5a.1 14353294 14359065 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259820   573   X: 14353294-14353866 Caenorhabditis elegans
Exon259825   78   X: 14353972-14354049 Caenorhabditis elegans
Exon259833   110   X: 14354484-14354593 Caenorhabditis elegans
Exon259842   150   X: 14354641-14354790 Caenorhabditis elegans
Exon259849   153   X: 14355422-14355574 Caenorhabditis elegans
Exon259857   166   X: 14355618-14355783 Caenorhabditis elegans
Exon259863   53   X: 14357239-14357291 Caenorhabditis elegans
Exon259871   148   X: 14357390-14357537 Caenorhabditis elegans
Exon259875   124   X: 14358328-14358451 Caenorhabditis elegans
Exon259883   70   X: 14358996-14359065 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K04G11.5a.1 14353294 14359065 -1

1 Sequence

Length
1625

1 Sequence Ontology Term

Identifier Name Description
transcript