WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K04G11.5d.1 Sequence Name  K04G11.5d.1
Length (nt)  1110   Chromosome Location  X: 14353785-14359056
Chromosome . Primary Identifier  X Chromosome Location . Start  14353785
Chromosome Location . End  14359056 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04G11.5d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002151 irk-3 K04G11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04G11.5d K04G11.5d 1110   X: 14353785-14353866

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K04G11.5d.1 14353785 14359056 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259823   82   X: 14353785-14353866 Caenorhabditis elegans
Exon259830   78   X: 14353972-14354049 Caenorhabditis elegans
Exon259838   110   X: 14354484-14354593 Caenorhabditis elegans
Exon259847   150   X: 14354641-14354790 Caenorhabditis elegans
Exon259854   153   X: 14355422-14355574 Caenorhabditis elegans
Exon259862   166   X: 14355618-14355783 Caenorhabditis elegans
Exon259868   53   X: 14357239-14357291 Caenorhabditis elegans
Exon259870   133   X: 14357390-14357522 Caenorhabditis elegans
Exon259880   124   X: 14358328-14358451 Caenorhabditis elegans
Exon259882   61   X: 14358996-14359056 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K04G11.5d.1 14353785 14359056 -1

1 Sequence

Length
1110

1 Sequence Ontology Term

Identifier Name Description
transcript