WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T25G3.2.1 Sequence Name  T25G3.2.1
Length (nt)  4288   Chromosome Location  I: 7554855-7559629
Chromosome . Primary Identifier  I Chromosome Location . Start  7554855
Chromosome Location . End  7559629 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T25G3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000496 chs-1 T25G3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T25G3.2 T25G3.2 3969   I: 7555001-7555108

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T25G3.2.1 7554855 7559629 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon19436   254   I: 7554855-7555108 Caenorhabditis elegans
Exon19438   142   I: 7555157-7555298 Caenorhabditis elegans
Exon19440   602   I: 7555343-7555944 Caenorhabditis elegans
Exon19442   92   I: 7555989-7556080 Caenorhabditis elegans
Exon19444   348   I: 7556129-7556476 Caenorhabditis elegans
Exon19446   1472   I: 7556525-7557996 Caenorhabditis elegans
Exon19448   383   I: 7558043-7558425 Caenorhabditis elegans
Exon19450   403   I: 7558471-7558873 Caenorhabditis elegans
Exon19452   255   I: 7558927-7559181 Caenorhabditis elegans
Exon19455   337   I: 7559293-7559629 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T25G3.2.1 7554855 7559629 1

1 Sequence

Length
4288

1 Sequence Ontology Term

Identifier Name Description
transcript