WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2030.1.1 Sequence Name  D2030.1.1
Length (nt)  1964   Chromosome Location  I: 7567827-7570553
Chromosome . Primary Identifier  I Chromosome Location . Start  7567827
Chromosome Location . End  7570553 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2030.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008411 mans-1 D2030.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2030.1 D2030.1 1623   I: 7568093-7568281

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2030.1.1 7567827 7570553 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon19472   455   I: 7567827-7568281 Caenorhabditis elegans
Exon19473   194   I: 7568633-7568826 Caenorhabditis elegans
Exon19474   342   I: 7568875-7569216 Caenorhabditis elegans
Exon19475   394   I: 7569270-7569663 Caenorhabditis elegans
Exon19476   349   I: 7569772-7570120 Caenorhabditis elegans
Exon19477   172   I: 7570165-7570336 Caenorhabditis elegans
Exon19478   58   I: 7570496-7570553 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2030.1.1 7567827 7570553 -1

1 Sequence

Length
1964

1 Sequence Ontology Term

Identifier Name Description
transcript