WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T14C1.1.1 Sequence Name  T14C1.1.1
Length (nt)  1590   Chromosome Location  X: 14406117-14411258
Chromosome . Primary Identifier  X Chromosome Location . Start  14406117
Chromosome Location . End  14411258 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T14C1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011765 frpr-17 T14C1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T14C1.1 T14C1.1 1212   X: 14406177-14406335

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T14C1.1.1 14406117 14411258 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon259912   219   X: 14406117-14406335 Caenorhabditis elegans
Exon259913   139   X: 14406692-14406830 Caenorhabditis elegans
Exon259914   227   X: 14407389-14407615 Caenorhabditis elegans
Exon259915   197   X: 14407728-14407924 Caenorhabditis elegans
Exon259916   92   X: 14408436-14408527 Caenorhabditis elegans
Exon259917   196   X: 14408850-14409045 Caenorhabditis elegans
Exon259918   225   X: 14409248-14409472 Caenorhabditis elegans
Exon259919   295   X: 14410964-14411258 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T14C1.1.1 14406117 14411258 1

1 Sequence

Length
1590

1 Sequence Ontology Term

Identifier Name Description
transcript