WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2030.10a.1 Sequence Name  D2030.10a.1
Length (nt)  3225   Chromosome Location  I: 7602307-7608184
Chromosome . Primary Identifier  I Chromosome Location . Start  7602307
Chromosome Location . End  7608184 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2030.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000084 aex-1 D2030.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2030.10a D2030.10a 3030   I: 7602324-7602422

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2030.10a.1 7602307 7608184 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon19617   116   I: 7602307-7602422 Caenorhabditis elegans
Exon19619   54   I: 7602612-7602665 Caenorhabditis elegans
Exon19621   74   I: 7602715-7602788 Caenorhabditis elegans
Exon19623   51   I: 7603015-7603065 Caenorhabditis elegans
Exon19625   331   I: 7603362-7603692 Caenorhabditis elegans
Exon19627   98   I: 7603765-7603862 Caenorhabditis elegans
Exon19629   40   I: 7603909-7603948 Caenorhabditis elegans
Exon19631   84   I: 7603999-7604082 Caenorhabditis elegans
Exon19633   405   I: 7604170-7604574 Caenorhabditis elegans
Exon19635   343   I: 7604721-7605063 Caenorhabditis elegans
Exon19637   77   I: 7605448-7605524 Caenorhabditis elegans
Exon19640   171   I: 7605569-7605739 Caenorhabditis elegans
Exon19642   186   I: 7605922-7606107 Caenorhabditis elegans
Exon19644   101   I: 7606159-7606259 Caenorhabditis elegans
Exon19646   395   I: 7606310-7606704 Caenorhabditis elegans
Exon19648   172   I: 7606862-7607033 Caenorhabditis elegans
Exon19650   69   I: 7607234-7607302 Caenorhabditis elegans
Exon19652   139   I: 7607688-7607826 Caenorhabditis elegans
Exon19654   319   I: 7607866-7608184 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2030.10a.1 7602307 7608184 1

1 Sequence

Length
3225

1 Sequence Ontology Term

Identifier Name Description
transcript