WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2030.10b.1 Sequence Name  D2030.10b.1
Length (nt)  3222   Chromosome Location  I: 7602324-7608245
Chromosome . Primary Identifier  I Chromosome Location . Start  7602324
Chromosome Location . End  7608245 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2030.10b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000084 aex-1 D2030.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2030.10b D2030.10b 2766   I: 7602324-7602422

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2030.10b.1 7602324 7608245 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon19618   99   I: 7602324-7602422 Caenorhabditis elegans
Exon19620   54   I: 7602612-7602665 Caenorhabditis elegans
Exon19622   74   I: 7602715-7602788 Caenorhabditis elegans
Exon19624   51   I: 7603015-7603065 Caenorhabditis elegans
Exon19626   331   I: 7603362-7603692 Caenorhabditis elegans
Exon19628   98   I: 7603765-7603862 Caenorhabditis elegans
Exon19630   40   I: 7603909-7603948 Caenorhabditis elegans
Exon19632   84   I: 7603999-7604082 Caenorhabditis elegans
Exon19634   405   I: 7604170-7604574 Caenorhabditis elegans
Exon19636   343   I: 7604721-7605063 Caenorhabditis elegans
Exon19638   77   I: 7605448-7605524 Caenorhabditis elegans
Exon19641   171   I: 7605569-7605739 Caenorhabditis elegans
Exon19643   186   I: 7605922-7606107 Caenorhabditis elegans
Exon19645   101   I: 7606159-7606259 Caenorhabditis elegans
Exon19647   395   I: 7606310-7606704 Caenorhabditis elegans
Exon19649   172   I: 7606862-7607033 Caenorhabditis elegans
Exon19651   69   I: 7607234-7607302 Caenorhabditis elegans
Exon19653   92   I: 7607735-7607826 Caenorhabditis elegans
Exon19655   380   I: 7607866-7608245 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2030.10b.1 7602324 7608245 1

1 Sequence

Length
3222

1 Sequence Ontology Term

Identifier Name Description
transcript