WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M163.4.1 Sequence Name  M163.4.1
Length (nt)  2635   Chromosome Location  X: 14480572-14484702
Chromosome . Primary Identifier  X Chromosome Location . Start  14480572
Chromosome Location . End  14484702 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M163.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001583 gfi-3 M163.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M163.4 M163.4 2403   X: 14480574-14480684

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:M163.4.1 14480572 14484702 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon260033   113   X: 14480572-14480684 Caenorhabditis elegans
Exon260034   101   X: 14480735-14480835 Caenorhabditis elegans
Exon260035   123   X: 14480886-14481008 Caenorhabditis elegans
Exon260036   190   X: 14481198-14481387 Caenorhabditis elegans
Exon260037   92   X: 14481437-14481528 Caenorhabditis elegans
Exon260038   97   X: 14481571-14481667 Caenorhabditis elegans
Exon260039   179   X: 14482012-14482190 Caenorhabditis elegans
Exon260040   117   X: 14482250-14482366 Caenorhabditis elegans
Exon260041   143   X: 14482412-14482554 Caenorhabditis elegans
Exon260042   64   X: 14482618-14482681 Caenorhabditis elegans
Exon260043   132   X: 14482736-14482867 Caenorhabditis elegans
Exon260044   111   X: 14482914-14483024 Caenorhabditis elegans
Exon260045   115   X: 14483071-14483185 Caenorhabditis elegans
Exon260046   245   X: 14483277-14483521 Caenorhabditis elegans
Exon260047   241   X: 14483573-14483813 Caenorhabditis elegans
Exon260048   572   X: 14484131-14484702 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:M163.4.1 14480572 14484702 1

1 Sequence

Length
2635

1 Sequence Ontology Term

Identifier Name Description
transcript