WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44H4.3.1 Sequence Name  C44H4.3.1
Length (nt)  2438   Chromosome Location  X: 14581622-14584378
Chromosome . Primary Identifier  X Chromosome Location . Start  14581622
Chromosome Location . End  14584378 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44H4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006366 sym-1 C44H4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44H4.3 C44H4.3 2043   X: 14581799-14581876

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C44H4.3.1 14581622 14584378 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon260185   255   X: 14581622-14581876 Caenorhabditis elegans
Exon260186   144   X: 14581928-14582071 Caenorhabditis elegans
Exon260187   144   X: 14582121-14582264 Caenorhabditis elegans
Exon260188   282   X: 14582318-14582599 Caenorhabditis elegans
Exon260189   444   X: 14582646-14583089 Caenorhabditis elegans
Exon260191   675   X: 14583141-14583815 Caenorhabditis elegans
Exon260192   494   X: 14583885-14584378 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C44H4.3.1 14581622 14584378 1

1 Sequence

Length
2438

1 Sequence Ontology Term

Identifier Name Description
transcript