WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44H4.7b.1 Sequence Name  C44H4.7b.1
Length (nt)  2984   Chromosome Location  X: 14603017-14608660
Chromosome . Primary Identifier  X Chromosome Location . Start  14603017
Chromosome Location . End  14608660 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44H4.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001325 eor-2 C44H4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44H4.7b C44H4.7b 2874   X: 14603092-14603161

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C44H4.7b.1 14603017 14608660 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon260227   145   X: 14603017-14603161 Caenorhabditis elegans
Exon260231   131   X: 14603249-14603379 Caenorhabditis elegans
Exon260234   171   X: 14603594-14603764 Caenorhabditis elegans
Exon260237   99   X: 14603857-14603955 Caenorhabditis elegans
Exon260241   423   X: 14604017-14604439 Caenorhabditis elegans
Exon260243   160   X: 14604589-14604748 Caenorhabditis elegans
Exon260247   89   X: 14605638-14605726 Caenorhabditis elegans
Exon260250   307   X: 14605772-14606078 Caenorhabditis elegans
Exon260253   295   X: 14606132-14606426 Caenorhabditis elegans
Exon260256   130   X: 14606629-14606758 Caenorhabditis elegans
Exon260260   144   X: 14606810-14606953 Caenorhabditis elegans
Exon260264   169   X: 14607003-14607171 Caenorhabditis elegans
Exon260268   138   X: 14607225-14607362 Caenorhabditis elegans
Exon260272   167   X: 14607852-14608018 Caenorhabditis elegans
Exon260276   234   X: 14608188-14608421 Caenorhabditis elegans
Exon260282   182   X: 14608479-14608660 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C44H4.7b.1 14603017 14608660 1

1 Sequence

Length
2984

1 Sequence Ontology Term

Identifier Name Description
transcript