WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44H4.7c.1 Sequence Name  C44H4.7c.1
Length (nt)  2947   Chromosome Location  X: 14603053-14608653
Chromosome . Primary Identifier  X Chromosome Location . Start  14603053
Chromosome Location . End  14608653 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44H4.7c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001325 eor-2 C44H4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44H4.7c C44H4.7c 2880   X: 14603092-14603161

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C44H4.7c.1 14603053 14608653 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon260228   109   X: 14603053-14603161 Caenorhabditis elegans
Exon260232   131   X: 14603249-14603379 Caenorhabditis elegans
Exon260235   171   X: 14603594-14603764 Caenorhabditis elegans
Exon260238   99   X: 14603857-14603955 Caenorhabditis elegans
Exon260239   429   X: 14604011-14604439 Caenorhabditis elegans
Exon260244   160   X: 14604589-14604748 Caenorhabditis elegans
Exon260248   89   X: 14605638-14605726 Caenorhabditis elegans
Exon260251   307   X: 14605772-14606078 Caenorhabditis elegans
Exon260254   295   X: 14606132-14606426 Caenorhabditis elegans
Exon260257   130   X: 14606629-14606758 Caenorhabditis elegans
Exon260261   144   X: 14606810-14606953 Caenorhabditis elegans
Exon260265   169   X: 14607003-14607171 Caenorhabditis elegans
Exon260269   138   X: 14607225-14607362 Caenorhabditis elegans
Exon260273   167   X: 14607852-14608018 Caenorhabditis elegans
Exon260277   234   X: 14608188-14608421 Caenorhabditis elegans
Exon260280   175   X: 14608479-14608653 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C44H4.7c.1 14603053 14608653 1

1 Sequence

Length
2947

1 Sequence Ontology Term

Identifier Name Description
transcript