WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44H4.7a.1 Sequence Name  C44H4.7a.1
Length (nt)  2975   Chromosome Location  X: 14603065-14608654
Chromosome . Primary Identifier  X Chromosome Location . Start  14603065
Chromosome Location . End  14608654 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44H4.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001325 eor-2 C44H4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44H4.7a C44H4.7a 2919   X: 14603092-14603161

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C44H4.7a.1 14603065 14608654 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon260229   97   X: 14603065-14603161 Caenorhabditis elegans
Exon260230   131   X: 14603249-14603379 Caenorhabditis elegans
Exon260233   171   X: 14603594-14603764 Caenorhabditis elegans
Exon260236   99   X: 14603857-14603955 Caenorhabditis elegans
Exon260240   423   X: 14604017-14604439 Caenorhabditis elegans
Exon260242   160   X: 14604589-14604748 Caenorhabditis elegans
Exon260245   45   X: 14604869-14604913 Caenorhabditis elegans
Exon260246   89   X: 14605638-14605726 Caenorhabditis elegans
Exon260249   307   X: 14605772-14606078 Caenorhabditis elegans
Exon260252   295   X: 14606132-14606426 Caenorhabditis elegans
Exon260255   130   X: 14606629-14606758 Caenorhabditis elegans
Exon260259   144   X: 14606810-14606953 Caenorhabditis elegans
Exon260263   169   X: 14607003-14607171 Caenorhabditis elegans
Exon260267   138   X: 14607225-14607362 Caenorhabditis elegans
Exon260271   167   X: 14607852-14608018 Caenorhabditis elegans
Exon260275   234   X: 14608188-14608421 Caenorhabditis elegans
Exon260281   176   X: 14608479-14608654 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C44H4.7a.1 14603065 14608654 1

1 Sequence

Length
2975

1 Sequence Ontology Term

Identifier Name Description
transcript