WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F27D4.1.1 Sequence Name  F27D4.1.1
Length (nt)  1130   Chromosome Location  I: 7702429-7704580
Chromosome . Primary Identifier  I Chromosome Location . Start  7702429
Chromosome Location . End  7704580 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F27D4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009187 etfa-1 F27D4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F27D4.1 F27D4.1 999   I: 7702434-7702481

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F27D4.1.1 7702429 7704580 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon19898   53   I: 7702429-7702481 Caenorhabditis elegans
Exon19899   93   I: 7702619-7702711 Caenorhabditis elegans
Exon19900   130   I: 7702911-7703040 Caenorhabditis elegans
Exon19901   291   I: 7703086-7703376 Caenorhabditis elegans
Exon19902   257   I: 7703923-7704179 Caenorhabditis elegans
Exon19903   111   I: 7704229-7704339 Caenorhabditis elegans
Exon19904   195   I: 7704386-7704580 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F27D4.1.1 7702429 7704580 1

1 Sequence

Length
1130

1 Sequence Ontology Term

Identifier Name Description
transcript