WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C26G2.1g.1 Sequence Name  C26G2.1g.1
Length (nt)  3081   Chromosome Location  X: 14656907-14662861
Chromosome . Primary Identifier  X Chromosome Location . Start  14656907
Chromosome Location . End  14662861 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C26G2.1g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007750 syg-2 C26G2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C26G2.1g C26G2.1g 2748   X: 14656954-14657032

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C26G2.1g.1 14656907 14662861 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon260597   126   X: 14656907-14657032 Caenorhabditis elegans
Exon260604   79   X: 14657093-14657171 Caenorhabditis elegans
Exon260608   82   X: 14657215-14657296 Caenorhabditis elegans
Exon260612   139   X: 14657344-14657482 Caenorhabditis elegans
Exon260616   134   X: 14657785-14657918 Caenorhabditis elegans
Exon260624   157   X: 14658346-14658502 Caenorhabditis elegans
Exon260631   184   X: 14658550-14658733 Caenorhabditis elegans
Exon260637   143   X: 14659097-14659239 Caenorhabditis elegans
Exon260643   287   X: 14659294-14659580 Caenorhabditis elegans
Exon260649   137   X: 14660024-14660160 Caenorhabditis elegans
Exon260655   316   X: 14660211-14660526 Caenorhabditis elegans
Exon260661   276   X: 14660691-14660966 Caenorhabditis elegans
Exon260667   271   X: 14661017-14661287 Caenorhabditis elegans
Exon260673   155   X: 14661429-14661583 Caenorhabditis elegans
Exon260679   82   X: 14661633-14661714 Caenorhabditis elegans
Exon260687   65   X: 14661766-14661830 Caenorhabditis elegans
Exon260693   448   X: 14662414-14662861 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C26G2.1g.1 14656907 14662861 1

1 Sequence

Length
3081

1 Sequence Ontology Term

Identifier Name Description
transcript