WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C26G2.1f.1 Sequence Name  C26G2.1f.1
Length (nt)  2787   Chromosome Location  X: 14656954-14662575
Chromosome . Primary Identifier  X Chromosome Location . Start  14656954
Chromosome Location . End  14662575 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C26G2.1f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007750 syg-2 C26G2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C26G2.1f C26G2.1f 2787   X: 14656954-14657032

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C26G2.1f.1 14656954 14662575 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon260600   79   X: 14656954-14657032 Caenorhabditis elegans
Exon260603   79   X: 14657093-14657171 Caenorhabditis elegans
Exon260607   82   X: 14657215-14657296 Caenorhabditis elegans
Exon260611   139   X: 14657344-14657482 Caenorhabditis elegans
Exon260615   134   X: 14657785-14657918 Caenorhabditis elegans
Exon260618   39   X: 14657966-14658004 Caenorhabditis elegans
Exon260623   157   X: 14658346-14658502 Caenorhabditis elegans
Exon260630   184   X: 14658550-14658733 Caenorhabditis elegans
Exon260636   143   X: 14659097-14659239 Caenorhabditis elegans
Exon260642   287   X: 14659294-14659580 Caenorhabditis elegans
Exon260648   137   X: 14660024-14660160 Caenorhabditis elegans
Exon260654   316   X: 14660211-14660526 Caenorhabditis elegans
Exon260660   276   X: 14660691-14660966 Caenorhabditis elegans
Exon260666   271   X: 14661017-14661287 Caenorhabditis elegans
Exon260672   155   X: 14661429-14661583 Caenorhabditis elegans
Exon260678   82   X: 14661633-14661714 Caenorhabditis elegans
Exon260686   65   X: 14661766-14661830 Caenorhabditis elegans
Exon260691   162   X: 14662414-14662575 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C26G2.1f.1 14656954 14662575 1

1 Sequence

Length
2787

1 Sequence Ontology Term

Identifier Name Description
transcript