WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C26G2.1d.1 Sequence Name  C26G2.1d.1
Length (nt)  2163   Chromosome Location  X: 14658418-14662575
Chromosome . Primary Identifier  X Chromosome Location . Start  14658418
Chromosome Location . End  14662575 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C26G2.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007750 syg-2 C26G2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C26G2.1d C26G2.1d 2163   X: 14658418-14658502

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C26G2.1d.1 14658418 14662575 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon260625   85   X: 14658418-14658502 Caenorhabditis elegans
Exon260628   184   X: 14658550-14658733 Caenorhabditis elegans
Exon260634   143   X: 14659097-14659239 Caenorhabditis elegans
Exon260640   287   X: 14659294-14659580 Caenorhabditis elegans
Exon260646   137   X: 14660024-14660160 Caenorhabditis elegans
Exon260652   316   X: 14660211-14660526 Caenorhabditis elegans
Exon260658   276   X: 14660691-14660966 Caenorhabditis elegans
Exon260664   271   X: 14661017-14661287 Caenorhabditis elegans
Exon260670   155   X: 14661429-14661583 Caenorhabditis elegans
Exon260676   82   X: 14661633-14661714 Caenorhabditis elegans
Exon260684   65   X: 14661766-14661830 Caenorhabditis elegans
Exon260689   162   X: 14662414-14662575 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C26G2.1d.1 14658418 14662575 1

1 Sequence

Length
2163

1 Sequence Ontology Term

Identifier Name Description
transcript