WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F40E10.4.1 Sequence Name  F40E10.4.1
Length (nt)  4577   Chromosome Location  X: 14674328-14683324
Chromosome . Primary Identifier  X Chromosome Location . Start  14674328
Chromosome Location . End  14683324 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40E10.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004854 slt-1 F40E10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F40E10.4 F40E10.4 4233   X: 14674375-14674520

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F40E10.4.1 14674328 14683324 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

32 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon260751   193   X: 14674328-14674520 Caenorhabditis elegans
Exon260752   72   X: 14674564-14674635 Caenorhabditis elegans
Exon260753   72   X: 14675083-14675154 Caenorhabditis elegans
Exon260754   72   X: 14675198-14675269 Caenorhabditis elegans
Exon260755   99   X: 14675322-14675420 Caenorhabditis elegans
Exon260756   108   X: 14675470-14675577 Caenorhabditis elegans
Exon260757   145   X: 14675646-14675790 Caenorhabditis elegans
Exon260758   161   X: 14675846-14676006 Caenorhabditis elegans
Exon260759   72   X: 14676478-14676549 Caenorhabditis elegans
Exon260760   72   X: 14676602-14676673 Caenorhabditis elegans
Exon260761   380   X: 14676724-14677103 Caenorhabditis elegans
Exon260762   97   X: 14677669-14677765 Caenorhabditis elegans
Exon260763   201   X: 14677815-14678015 Caenorhabditis elegans
Exon260764   72   X: 14678062-14678133 Caenorhabditis elegans
Exon260765   72   X: 14678189-14678260 Caenorhabditis elegans
Exon260766   149   X: 14678309-14678457 Caenorhabditis elegans
Exon260767   208   X: 14678507-14678714 Caenorhabditis elegans
Exon260768   97   X: 14678759-14678855 Caenorhabditis elegans
Exon260771   119   X: 14679465-14679583 Caenorhabditis elegans
Exon260772   156   X: 14679635-14679790 Caenorhabditis elegans
Exon260773   325   X: 14679841-14680165 Caenorhabditis elegans
Exon260774   134   X: 14680211-14680344 Caenorhabditis elegans
Exon260775   94   X: 14680882-14680975 Caenorhabditis elegans
Exon260776   126   X: 14681023-14681148 Caenorhabditis elegans
Exon260777   179   X: 14681193-14681371 Caenorhabditis elegans
Exon260778   125   X: 14681418-14681542 Caenorhabditis elegans
Exon260779   219   X: 14681593-14681811 Caenorhabditis elegans
Exon260780   108   X: 14682366-14682473 Caenorhabditis elegans
Exon260781   102   X: 14682523-14682624 Caenorhabditis elegans
Exon260782   113   X: 14682674-14682786 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F40E10.4.1 14674328 14683324 1

1 Sequence

Length
4577

1 Sequence Ontology Term

Identifier Name Description
transcript