WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11A5.7.1 Sequence Name  R11A5.7.1
Length (nt)  2206   Chromosome Location  I: 7872092-7875554
Chromosome . Primary Identifier  I Chromosome Location . Start  7872092
Chromosome Location . End  7875554 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11A5.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011235 suro-1 R11A5.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11A5.7 R11A5.7 1995   I: 7872265-7872385

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R11A5.7.1 7872092 7875554 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20409   294   I: 7872092-7872385 Caenorhabditis elegans
Exon20410   259   I: 7872467-7872725 Caenorhabditis elegans
Exon20411   99   I: 7872841-7872939 Caenorhabditis elegans
Exon20412   186   I: 7872989-7873174 Caenorhabditis elegans
Exon20413   90   I: 7873226-7873315 Caenorhabditis elegans
Exon20414   535   I: 7873587-7874121 Caenorhabditis elegans
Exon20415   284   I: 7874332-7874615 Caenorhabditis elegans
Exon20416   98   I: 7874663-7874760 Caenorhabditis elegans
Exon20417   140   I: 7874810-7874949 Caenorhabditis elegans
Exon20418   221   I: 7875334-7875554 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R11A5.7.1 7872092 7875554 -1

1 Sequence

Length
2206

1 Sequence Ontology Term

Identifier Name Description
transcript