WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22C1.1.1 Sequence Name  T22C1.1.1
Length (nt)  1750   Chromosome Location  I: 7936264-7938328
Chromosome . Primary Identifier  I Chromosome Location . Start  7936264
Chromosome Location . End  7938328 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22C1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011912 T22C1.1 T22C1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22C1.1 T22C1.1 1071   I: 7936266-7936323

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22C1.1.1 7936264 7938328 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20540   60   I: 7936264-7936323 Caenorhabditis elegans
Exon20541   443   I: 7936466-7936908 Caenorhabditis elegans
Exon20542   87   I: 7936965-7937051 Caenorhabditis elegans
Exon20543   337   I: 7937124-7937460 Caenorhabditis elegans
Exon20545   823   I: 7937506-7938328 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22C1.1.1 7936264 7938328 1

1 Sequence

Length
1750

1 Sequence Ontology Term

Identifier Name Description
transcript