WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05G5.3.1 Sequence Name  C05G5.3.1
Length (nt)  839   Chromosome Location  X: 14750849-14752011
Chromosome . Primary Identifier  X Chromosome Location . Start  14750849
Chromosome Location . End  14752011 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05G5.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007349 C05G5.3 C05G5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05G5.3 C05G5.3 660   X: 14751019-14751138

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05G5.3.1 14750849 14752011 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon260931   290   X: 14750849-14751138 Caenorhabditis elegans
Exon260932   138   X: 14751186-14751323 Caenorhabditis elegans
Exon260933   185   X: 14751369-14751553 Caenorhabditis elegans
Exon260934   52   X: 14751598-14751649 Caenorhabditis elegans
Exon260935   111   X: 14751790-14751900 Caenorhabditis elegans
Exon260936   63   X: 14751949-14752011 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05G5.3.1 14750849 14752011 -1

1 Sequence

Length
839

1 Sequence Ontology Term

Identifier Name Description
transcript