WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05G5.4.1 Sequence Name  C05G5.4.1
Length (nt)  1240   Chromosome Location  X: 14754026-14756081
Chromosome . Primary Identifier  X Chromosome Location . Start  14754026
Chromosome Location . End  14756081 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05G5.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007350 sucl-1 C05G5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05G5.4 C05G5.4 969   X: 14754032-14754077

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05G5.4.1 14754026 14756081 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon260938   52   X: 14754026-14754077 Caenorhabditis elegans
Exon260939   89   X: 14754123-14754211 Caenorhabditis elegans
Exon260940   378   X: 14754509-14754886 Caenorhabditis elegans
Exon260941   172   X: 14755008-14755179 Caenorhabditis elegans
Exon260942   221   X: 14755308-14755528 Caenorhabditis elegans
Exon260943   328   X: 14755754-14756081 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05G5.4.1 14754026 14756081 1

1 Sequence

Length
1240

1 Sequence Ontology Term

Identifier Name Description
transcript