WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22C1.10b.1 Sequence Name  T22C1.10b.1
Length (nt)  3876   Chromosome Location  I: 7962111-7972291
Chromosome . Primary Identifier  I Chromosome Location . Start  7962111
Chromosome Location . End  7972291 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22C1.10b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004318 rbg-2 T22C1.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22C1.10b T22C1.10b 3876   I: 7962111-7962162

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22C1.10b.1 7962111 7972291 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20603   52   I: 7962111-7962162 Caenorhabditis elegans
Exon20605   258   I: 7962216-7962473 Caenorhabditis elegans
Exon20607   245   I: 7962521-7962765 Caenorhabditis elegans
Exon20609   600   I: 7962958-7963557 Caenorhabditis elegans
Exon20611   147   I: 7963677-7963823 Caenorhabditis elegans
Exon20613   653   I: 7964342-7964994 Caenorhabditis elegans
Exon20615   571   I: 7965448-7966018 Caenorhabditis elegans
Exon20617   211   I: 7966686-7966896 Caenorhabditis elegans
Exon20625   65   I: 7970527-7970591 Caenorhabditis elegans
Exon20627   288   I: 7970689-7970976 Caenorhabditis elegans
Exon20629   393   I: 7971453-7971845 Caenorhabditis elegans
Exon20630   393   I: 7971899-7972291 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22C1.10b.1 7962111 7972291 1

1 Sequence

Length
3876

1 Sequence Ontology Term

Identifier Name Description
transcript