WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y16B4A.1.1 Sequence Name  Y16B4A.1.1
Length (nt)  2052   Chromosome Location  X: 14773538-14783568
Chromosome . Primary Identifier  X Chromosome Location . Start  14773538
Chromosome Location . End  14783568 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y16B4A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006743 unc-3 Y16B4A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y16B4A.1 Y16B4A.1 1476   X: 14773591-14773676

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y16B4A.1.1 14773538 14783568 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon260999   139   X: 14773538-14773676 Caenorhabditis elegans
Exon261000   60   X: 14776656-14776715 Caenorhabditis elegans
Exon261001   218   X: 14776884-14777101 Caenorhabditis elegans
Exon261002   56   X: 14777167-14777222 Caenorhabditis elegans
Exon261003   143   X: 14777521-14777663 Caenorhabditis elegans
Exon261005   82   X: 14779081-14779162 Caenorhabditis elegans
Exon261006   118   X: 14779987-14780104 Caenorhabditis elegans
Exon261007   170   X: 14781472-14781641 Caenorhabditis elegans
Exon261008   136   X: 14781691-14781826 Caenorhabditis elegans
Exon261009   139   X: 14781874-14782012 Caenorhabditis elegans
Exon261010   200   X: 14782061-14782260 Caenorhabditis elegans
Exon261011   591   X: 14782978-14783568 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y16B4A.1.1 14773538 14783568 1

1 Sequence

Length
2052

1 Sequence Ontology Term

Identifier Name Description
transcript