WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27C12.4.1 Sequence Name  C27C12.4.1
Length (nt)  1508   Chromosome Location  X: 14854086-14856522
Chromosome . Primary Identifier  X Chromosome Location . Start  14854086
Chromosome Location . End  14856522 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27C12.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007774 C27C12.4 C27C12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27C12.4 C27C12.4 1353   X: 14854154-14854240

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27C12.4.1 14854086 14856522 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261152   155   X: 14854086-14854240 Caenorhabditis elegans
Exon261153   71   X: 14854358-14854428 Caenorhabditis elegans
Exon261154   188   X: 14854479-14854666 Caenorhabditis elegans
Exon261155   142   X: 14854759-14854900 Caenorhabditis elegans
Exon261156   104   X: 14854979-14855082 Caenorhabditis elegans
Exon261157   192   X: 14855573-14855764 Caenorhabditis elegans
Exon261158   404   X: 14855818-14856221 Caenorhabditis elegans
Exon261159   252   X: 14856271-14856522 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27C12.4.1 14854086 14856522 1

1 Sequence

Length
1508

1 Sequence Ontology Term

Identifier Name Description
transcript