WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27C12.6.1 Sequence Name  C27C12.6.1
Length (nt)  964   Chromosome Location  X: 14857303-14861852
Chromosome . Primary Identifier  X Chromosome Location . Start  14857303
Chromosome Location . End  14861852 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27C12.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007776 dmd-4 C27C12.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27C12.6 C27C12.6 783   X: 14857433-14857540

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27C12.6.1 14857303 14861852 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261160   238   X: 14857303-14857540 Caenorhabditis elegans
Exon261161   430   X: 14857609-14858038 Caenorhabditis elegans
Exon261163   114   X: 14858818-14858931 Caenorhabditis elegans
Exon261164   60   X: 14861609-14861668 Caenorhabditis elegans
Exon261165   122   X: 14861731-14861852 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27C12.6.1 14857303 14861852 -1

1 Sequence

Length
964

1 Sequence Ontology Term

Identifier Name Description
transcript