WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F31F6.8.1 Sequence Name  F31F6.8.1
Length (nt)  801   Chromosome Location  X: 14875968-14878855
Chromosome . Primary Identifier  X Chromosome Location . Start  14875968
Chromosome Location . End  14878855 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31F6.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044138 sssh-1 F31F6.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31F6.8 F31F6.8 468   X: 14876165-14876210

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F31F6.8.1 14875968 14878855 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261210   243   X: 14875968-14876210 Caenorhabditis elegans
Exon261212   149   X: 14876255-14876403 Caenorhabditis elegans
Exon261213   85   X: 14878336-14878420 Caenorhabditis elegans
Exon261214   84   X: 14878474-14878557 Caenorhabditis elegans
Exon261215   240   X: 14878616-14878855 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F31F6.8.1 14875968 14878855 1

1 Sequence

Length
801

1 Sequence Ontology Term

Identifier Name Description
transcript