WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y70D2A.1.1 Sequence Name  Y70D2A.1.1
Length (nt)  3684   Chromosome Location  X: 14918838-14924164
Chromosome . Primary Identifier  X Chromosome Location . Start  14918838
Chromosome Location . End  14924164 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y70D2A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013496 npr-40 Y70D2A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y70D2A.1 Y70D2A.1 1320   X: 14920926-14921036

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y70D2A.1.1 14918838 14924164 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261249   2199   X: 14918838-14921036 Caenorhabditis elegans
Exon261253   144   X: 14921290-14921433 Caenorhabditis elegans
Exon261255   102   X: 14922090-14922191 Caenorhabditis elegans
Exon261257   95   X: 14922238-14922332 Caenorhabditis elegans
Exon261259   115   X: 14922380-14922494 Caenorhabditis elegans
Exon261261   152   X: 14922547-14922698 Caenorhabditis elegans
Exon261263   196   X: 14922771-14922966 Caenorhabditis elegans
Exon261265   179   X: 14923390-14923568 Caenorhabditis elegans
Exon261267   120   X: 14923615-14923734 Caenorhabditis elegans
Exon261270   382   X: 14923783-14924164 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y70D2A.1.1 14918838 14924164 1

1 Sequence

Length
3684

1 Sequence Ontology Term

Identifier Name Description
transcript