WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F18C12.1.1 Sequence Name  F18C12.1.1
Length (nt)  12568   Chromosome Location  I: 8062007-8081671
Chromosome . Primary Identifier  I Chromosome Location . Start  8062007
Chromosome Location . End  8081671 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F18C12.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000485 che-3 F18C12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F18C12.1 F18C12.1 12516   I: 8062059-8062505

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F18C12.1.1 8062007 8081671 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

48 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20931   499   I: 8062007-8062505 Caenorhabditis elegans
Exon20932   383   I: 8062719-8063101 Caenorhabditis elegans
Exon20933   133   I: 8063551-8063683 Caenorhabditis elegans
Exon20934   188   I: 8063754-8063941 Caenorhabditis elegans
Exon20935   334   I: 8063988-8064321 Caenorhabditis elegans
Exon20936   281   I: 8064612-8064892 Caenorhabditis elegans
Exon20937   463   I: 8065379-8065841 Caenorhabditis elegans
Exon20938   144   I: 8066340-8066483 Caenorhabditis elegans
Exon20939   861   I: 8066529-8067389 Caenorhabditis elegans
Exon20940   244   I: 8067436-8067679 Caenorhabditis elegans
Exon20941   122   I: 8068242-8068363 Caenorhabditis elegans
Exon20942   124   I: 8068408-8068531 Caenorhabditis elegans
Exon20943   149   I: 8068584-8068732 Caenorhabditis elegans
Exon20944   126   I: 8068780-8068905 Caenorhabditis elegans
Exon20945   138   I: 8068953-8069090 Caenorhabditis elegans
Exon20946   195   I: 8069165-8069359 Caenorhabditis elegans
Exon20947   143   I: 8069401-8069543 Caenorhabditis elegans
Exon20948   223   I: 8069753-8069975 Caenorhabditis elegans
Exon20949   233   I: 8070022-8070254 Caenorhabditis elegans
Exon20950   138   I: 8070304-8070441 Caenorhabditis elegans
Exon20951   538   I: 8070565-8071102 Caenorhabditis elegans
Exon20952   282   I: 8071506-8071787 Caenorhabditis elegans
Exon20953   457   I: 8071840-8072296 Caenorhabditis elegans
Exon20954   122   I: 8072508-8072629 Caenorhabditis elegans
Exon20955   330   I: 8072678-8073007 Caenorhabditis elegans
Exon20956   332   I: 8073161-8073492 Caenorhabditis elegans
Exon20957   298   I: 8073543-8073840 Caenorhabditis elegans
Exon20958   212   I: 8074104-8074315 Caenorhabditis elegans
Exon20959   349   I: 8074362-8074710 Caenorhabditis elegans
Exon20960   384   I: 8074803-8075186 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F18C12.1.1 8062007 8081671 -1

1 Sequence

Length
12568

1 Sequence Ontology Term

Identifier Name Description
transcript