WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14F4.3.1 Sequence Name  F14F4.3.1
Length (nt)  4724   Chromosome Location  X: 14938502-14946317
Chromosome . Primary Identifier  X Chromosome Location . Start  14938502
Chromosome Location . End  14946317 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14F4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003411 mrp-5 F14F4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14F4.3 F14F4.3 4284   X: 14938942-14939171

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F14F4.3.1 14938502 14946317 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261281   670   X: 14938502-14939171 Caenorhabditis elegans
Exon261282   172   X: 14939417-14939588 Caenorhabditis elegans
Exon261283   609   X: 14939639-14940247 Caenorhabditis elegans
Exon261284   391   X: 14940306-14940696 Caenorhabditis elegans
Exon261285   169   X: 14940742-14940910 Caenorhabditis elegans
Exon261286   130   X: 14941460-14941589 Caenorhabditis elegans
Exon261287   147   X: 14941635-14941781 Caenorhabditis elegans
Exon261288   133   X: 14941834-14941966 Caenorhabditis elegans
Exon261289   296   X: 14942012-14942307 Caenorhabditis elegans
Exon261290   81   X: 14942805-14942885 Caenorhabditis elegans
Exon261291   324   X: 14942931-14943254 Caenorhabditis elegans
Exon261292   170   X: 14943304-14943473 Caenorhabditis elegans
Exon261293   366   X: 14943526-14943891 Caenorhabditis elegans
Exon261294   148   X: 14943937-14944084 Caenorhabditis elegans
Exon261295   265   X: 14944144-14944408 Caenorhabditis elegans
Exon261296   234   X: 14944453-14944686 Caenorhabditis elegans
Exon261297   72   X: 14944736-14944807 Caenorhabditis elegans
Exon261298   165   X: 14944860-14945024 Caenorhabditis elegans
Exon261299   105   X: 14946066-14946170 Caenorhabditis elegans
Exon261300   77   X: 14946241-14946317 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F14F4.3.1 14938502 14946317 -1

1 Sequence

Length
4724

1 Sequence Ontology Term

Identifier Name Description
transcript